The detailed information of tRNA gene sequence


Sequence ID>WENV180079359
Genome IDMPMB02156402
Search identical group
Phylum/Class[MPMB] marine metagenome; 300 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 1546
End posion on genome 1635
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttgaaaaaac
tRNA gene sequence 
GGAGAGATGGCCGAGTGGTTTAAGGCGCAGGCTTGGAAAGCTTGTATACTGTTAAAGGTA
TCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
ttagagcggg
Secondary structure (Cloverleaf model)
>WENV180079359	Ser	GGA
                   c      GCCA ttagagcggg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TATACTGTTAAAGGTATC
                    C - G
                    A - T
                    G + T
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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