The detailed information of tRNA gene sequence


Sequence ID>WENV180079380
Genome IDMPMB02157757
Search identical group
Phylum/Class[MPMB] marine metagenome; 300 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 1138
End posion on genome 1046
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
nnngttctgc
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCTGAAGGCGGCGGTTTGCTAAACCGTTATACGGAGACAATCC
GTATCGGGGGTTCGAATCCCCCTCTCTCCGCCA
Downstream region at tRNA end position 
ctttactgtt
Secondary structure (Cloverleaf model)
>WENV180079380	Ser	GCT
                   c      GCCA ctttactgtt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATACGGAGACAATCCGTATC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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