The detailed information of tRNA gene sequence


Sequence ID>WENV180079391
Genome IDMPMB02158407
Search identical group
Phylum/Class[MPMB] marine metagenome; 300 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 1238
End posion on genome 1149
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tagttaaaaa
tRNA gene sequence 
GGAGAGATGGCCGAGTGGTTTAAGGCGCACGCTTGGAAAGCGTGTGTACCCTCACAGGTA
CCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
gaagtgcgga
Secondary structure (Cloverleaf model)
>WENV180079391	Ser	GGA
                   a      GCCA gaagtgcgga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TGTACCCTCACAGGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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