The detailed information of tRNA gene sequence


Sequence ID>WENV180079419
Genome IDMPMB02160098
Search identical group
Phylum/Class[MPMB] marine metagenome; 300 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 1104
End posion on genome 1180
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
acgatattat
tRNA gene sequence 
GGCGGGATAGCTCAGTTGGTTAGAGCGCGGGACTCATAAGCCCGAGGTCGTCAGTTCAAT
TCTGACTCCCGCTACCA
Downstream region at tRNA end position 
ttatttaaaa
Secondary structure (Cloverleaf model)
>WENV180079419	Met	CAT
                   t      ACCA ttatttaaaa
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T T
                    T     C A G T C     A
      T G A        A      | | | | |     A
    T       C T C G       G T C A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    G - C
                    G - C
                    G - C
                    A   G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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