The detailed information of tRNA gene sequence


Sequence ID>WENV180079466
Genome IDMPMB02162672
Search identical group
Phylum/Class[MPMB] marine metagenome; 300 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 877
End posion on genome 784
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
nnnnnnnnnt
tRNA gene sequence 
GGAAGGATGGGTGAGTTGGTTTAAACCAGGAGTTTGCTAAACTTCCGTAGGTTATAATGA
CCTACCGAGGGTTCGAATCCCTCTCCTTCCGCCA
Downstream region at tRNA end position 
caaaaaacta
Secondary structure (Cloverleaf model)
>WENV180079466	Ser	GCT
                   t      GCCA caaaaaacta
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     A - T          T A
                    T     C T C C C     A
    T T G A        G      | | | | |     G
  G         G T G G       G A G G G     C
  G           | | |                 T T
  T         A A C C
    T T A          A     CGTAGGTTATAATGACCTACC
                    G - C
                    G + T
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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