The detailed information of tRNA gene sequence


Sequence ID>WENV180079597
Genome IDMPMB02170803
Search identical group
Phylum/Class[MPMB] marine metagenome; 300 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 413
End posion on genome 317
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ttctccgggc
tRNA gene sequence 
GGGAGTGGATCGGTGCCGGTGTGCCGCCTGGACTTCAAATCCAGTGGACGGGGCTAGACA
CTTCGTCGGTGGGTTCGACTCCCACGCATTCCCGCCA
Downstream region at tRNA end position 
aattgccaca
Secondary structure (Cloverleaf model)
>WENV180079597	SeC	TCA
                   c      GCCA aattgccaca
                     G - C
                     G - C
                     G - C
                     A - T
                     G + T
                     T - A
                     G - C
                     G   G          T C
                    A     C A C C C     A
      C C G        T      | | | | |     G
    G       T G G C       G T G G G     C
    G       + | | |                 T T
    T       G C C G
      G T          C     TGGACGGGGCTAGACACTTCGTCG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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