The detailed information of tRNA gene sequence


Sequence ID>WENV180079629
Genome IDMPMB02172474
Search identical group
Phylum/Class[MPMB] marine metagenome; 300 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 760
End posion on genome 669
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
nnnnnncttc
tRNA gene sequence 
GGAGAGATGGCCGAGTGGCTGAAGGCGCTCCCCTGCTAAGGGAGTATAGGCTTTAACTCC
TATCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
ttttaattga
Secondary structure (Cloverleaf model)
>WENV180079629	Ser	GCT
                   c      GCCA ttttaattga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATAGGCTTTAACTCCTATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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