The detailed information of tRNA gene sequence


Sequence ID>WENV180079660
Genome IDMPMB02175226
Search identical group
Phylum/Class[MPMB] marine metagenome; 300 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 402
End posion on genome 312
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tgatgcatat
tRNA gene sequence 
GGAGGGGTGGCCGAGTGGTTGAAGGCGCACGCCTGGAAAGTGTGTATACGGCAAAACCGT
ATCGTGGGTTCGAATCCCACTCCCTCCGCCA
Downstream region at tRNA end position 
ctttcctcgc
Secondary structure (Cloverleaf model)
>WENV180079660	Ser	GGA
                   t      GCCA ctttcctcgc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TATACGGCAAAACCGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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