The detailed information of tRNA gene sequence


Sequence ID>WENV180079675
Genome IDMPMB02176620
Search identical group
Phylum/Class[MPMB] marine metagenome; 300 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 260
End posion on genome 356
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tgctgctggc
tRNA gene sequence 
GGGGATGGTTGAGTCCCGGTGGGCTCCGCGGTCTTCAAAACCGTTGGTGGGTCGCCCGAG
CGAGCCACGGTGGGTTCGACACCCATCCATCCCCGCCt
Downstream region at tRNA end position 
cttttcgcgc
Secondary structure (Cloverleaf model)
>WENV180079675	SeC	TCA
                   c      GCCt cttttcgcgc
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C
                     G - C          A C
                    T     T A C C C     A
      C C C        T      + | | | |     G
    G       T G A G       G T G G G     C
    G       + | | |                 T T
    T       G C T C
      G G          C     TGGTGGGTCGCCCGAGCGAGCCACG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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