The detailed information of tRNA gene sequence


Sequence ID>WENV180079773
Genome IDMPMB02183185
Search identical group
Phylum/Class[MPMB] marine metagenome; 300 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 410
End posion on genome 317
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tagacaattt
tRNA gene sequence 
GGGAATGATTAGGAGGCTGGTGCCCCTCGCGGTCTTCAACACCGTTGTCCCCGTGATAAG
CGGGGAGTTGGGTTCGATTCCCAAACGTTCCCGCaa
Downstream region at tRNA end position 
atatttaatg
Secondary structure (Cloverleaf model)
>WENV180079773	SeC	TCA
                   t      GCaa atatttaatg
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     T + G
                     G - C
                     A   A          T T
                    T     A A C C C     A
      C G G        T      | | | | |     G
    T       A G G A       T T G G G     C
    G         | | |                 T T
    G       C C C T
      T G C        C     TGTCCCCGTGATAAGCGGGGAG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       C
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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