The detailed information of tRNA gene sequence


Sequence ID>WENV180079784
Genome IDMPMB02183581
Search identical group
Phylum/Class[MPMB] marine metagenome; 300 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 6884
End posion on genome 6791
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tagactatta
tRNA gene sequence 
GGAAGCGTGGGTGAGCCTGGCTTAAACCAACAGTTTGCTAAATTGTCATAGGGTTAATTC
CCTATCATCCGTTCAAATCGGATCGCTTCCGCCA
Downstream region at tRNA end position 
taaatattaa
Secondary structure (Cloverleaf model)
>WENV180079784	Ser	GCT
                   a      GCCA taaatattaa
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     T A G G C     A
    C C G A        G      | | | | |     A
  T         G T G G       A T C C G     C
  G           | | |                 T T
  G         A A C C
    C T T A        A     CATAGGGTTAATTCCCTATC
                    A - T
                    C - G
                    A - T
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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