The detailed information of tRNA gene sequence


Sequence ID>WENV180079832
Genome IDMPMB02186771
Search identical group
Phylum/Class[MPMB] marine metagenome; 300 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 3033
End posion on genome 2957
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
ccgttcggat
tRNA gene sequence 
CGCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCGTAGGTTCAAA
TCCTACTCCCGCAACCA
Downstream region at tRNA end position 
atttcccttt
Secondary structure (Cloverleaf model)
>WENV180079832	fMet	CAT
                   t      ACCA atttcccttt
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C A T C C     A
      C G A        G      | | | | |     A
    C       C G A G       G T A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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