The detailed information of tRNA gene sequence


Sequence ID>WENV180079958
Genome IDMPMB02196037
Search identical group
Phylum/Class[MPMB] marine metagenome; 300 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 1389
End posion on genome 1478
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaccccctaa
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCTGAAGGCGCTGGTTTGCTAAATCAGTATACGGGCAACCGTA
TCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
tttatcaatc
Secondary structure (Cloverleaf model)
>WENV180079958	Ser	GCT
                   a      GCCA tttatcaatc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATACGGGCAACCGTATC
                    C - G
                    T - A
                    G - C
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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