The detailed information of tRNA gene sequence


Sequence ID>WENV180080070
Genome IDMPMB02203508
Search identical group
Phylum/Class[MPMB] marine metagenome; 300 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 5231
End posion on genome 5155
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
agtcagttga
tRNA gene sequence 
CGCGGGGTGGAGCAGTCCGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGGGGGTTCAAA
TCCCCCCCCCGCAACCA
Downstream region at tRNA end position 
cgtttccggc
Secondary structure (Cloverleaf model)
>WENV180080070	fMet	CAT
                   a      ACCA cgtttccggc
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     A
    C       C G A G       G G G G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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