The detailed information of tRNA gene sequence


Sequence ID>WENV180080120
Genome IDMPMB02207597
Search identical group
Phylum/Class[MPMB] marine metagenome; 300 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 24815
End posion on genome 24908
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aaataatttt
tRNA gene sequence 
GGGAATGATTAGGAGGCTGGTGCCCCTCGTGGTCTTCAAAACCATTGGGATCTACACAAT
AGATCCGGTGAGTTCGATTCTCACGCGTTCCCGCta
Downstream region at tRNA end position 
aaatgaaaac
Secondary structure (Cloverleaf model)
>WENV180080120	SeC	TCA
                   t      GCta aaatgaaaac
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     T + G
                     G - C
                     A   G          T T
                    T     C A C T C     A
      C G G        T      | | | | |     G
    T       A G G A       G T G A G     C
    G         | | |                 T T
    G       C C C T
      T G C        C     TGGGATCTACACAATAGATCCG
                    G + T
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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