The detailed information of tRNA gene sequence


Sequence ID>WENV180080182
Genome IDMPMB02212010
Search identical group
Phylum/Class[MPMB] marine metagenome; 300 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 155
End posion on genome 63
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gtttcgaccc
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGCTGAAGGCGCTCCCCTGCTAAGGGAGTATGGGGTTTATAGCT
CCATCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
tcacccacac
Secondary structure (Cloverleaf model)
>WENV180080182	Ser	GCT
                   c      GCCA tcacccacac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATGGGGTTTATAGCTCCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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