The detailed information of tRNA gene sequence


Sequence ID>WENV180080232
Genome IDMPMB02214241
Search identical group
Phylum/Class[MPMB] marine metagenome; 300 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 2576
End posion on genome 2484
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
catttgacac
tRNA gene sequence 
GGAGAGGTGGCAGAGATGGTTGATCGCACCAGGTTGCTAACTTGGCAAACGGAGTAATTC
GTTTCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
aacattattt
Secondary structure (Cloverleaf model)
>WENV180080232	Ser	GCT
                   c      GCCA aacattattt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    T A G A        G      | | | | |     G
  G         G A C G       G A G G G     C
  G         +   | |                 T T
  T         T C G C
    T G A          A     CAAACGGAGTAATTCGTTTC
                    C - G
                    C - G
                    A - T
                    G + T
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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