The detailed information of tRNA gene sequence


Sequence ID>WENV180080250
Genome IDMPMB02215655
Search identical group
Phylum/Class[MPMB] marine metagenome; 300 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 1897
End posion on genome 1807
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cattaagaaa
tRNA gene sequence 
GGAGAGATGGCAGAGTGGTCGATTGCGCACGCTTGGAAAGCGTGTAAGGGTTAATAGCCC
TTCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
ttaaaagctc
Secondary structure (Cloverleaf model)
>WENV180080250	Ser	GGA
                   a      GCCA ttaaaagctc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G A G G G     C
    G       + | | |                 T T
    T       T T G C
      C G A        G     TAAGGGTTAATAGCCCTTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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