The detailed information of tRNA gene sequence


Sequence ID>WENV180080303
Genome IDMPMB02220498
Search identical group
Phylum/Class[MPMB] marine metagenome; 300 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 1369
End posion on genome 1282
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gtctccccgg
tRNA gene sequence 
GGAGAGGTGCCGGAGTGGACGATCGGGGCGCTCTCGAAAAGCGTTGTGGCCTCGCGGTCA
CCGTGGGTTCGAATCCCACCCTCTCCGCtg
Downstream region at tRNA end position 
ctcagaatca
Secondary structure (Cloverleaf model)
>WENV180080303	Ser	CGA
                   g      GCtg ctcagaatca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G G C C       G T G G G     C
    G       + | | |                 T T
    A       T C G G
      C G A        G     TGTGGCCTCGCGGTCACC
                    G + T
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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