The detailed information of tRNA gene sequence


Sequence ID>WENV180080372
Genome IDMPMC02007729
Search identical group
Phylum/Class[MPMC] marine metagenome; 100 m water sample filtered on 30 um supor filter
Species
Start position on genome 486
End posion on genome 397
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cctcgcaggc
tRNA gene sequence 
GGAAGGTTGCCAGAGCGGACGAATGGGGCGGCCTCGAAAGCCGTTGTGGCCTCCGGGTCA
CCGTGGGTTCGAATCCCACACCTTCCGCCA
Downstream region at tRNA end position 
tctgcagact
Secondary structure (Cloverleaf model)
>WENV180080372	Ser	CGA
                   c      GCCA tctgcagact
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     T - A          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G A C C       G T G G G     C
    G         | | |                 T T
    A       A T G G
      C G A        G     TGTGGCCTCCGGGTCACC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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