The detailed information of tRNA gene sequence


Sequence ID>WENV180080672
Genome IDMPMC02041832
Search identical group
Phylum/Class[MPMC] marine metagenome; 100 m water sample filtered on 30 um supor filter
Species
Start position on genome 391
End posion on genome 465
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
gcacccttga
tRNA gene sequence 
CGCGGGGTGGAGCAGTTTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAA
TCCGGCCCCCGCAACtg
Downstream region at tRNA end position 
aaatcaggcg
Secondary structure (Cloverleaf model)
>WENV180080672	fMet	CAT
                   a      ACtg aaatcaggcg
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G G C C     A
      T G A        G      | + | | |     A
    T       C G A G       G T C G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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