The detailed information of tRNA gene sequence


Sequence ID>WENV180080779
Genome IDMPMC02050962
Search identical group
Phylum/Class[MPMC] marine metagenome; 100 m water sample filtered on 30 um supor filter
Species
Start position on genome 1224
End posion on genome 1135
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aatgcttttc
tRNA gene sequence 
GGAGGGGTGGGTGAGTGGCTTAAACCAGTACATTGCTAATGTGCCGTACGCGAAAGTGTA
CCGAGGGTTCGAATCCCTCTCCCTCCGCCA
Downstream region at tRNA end position 
caaccctatt
Secondary structure (Cloverleaf model)
>WENV180080779	Ser	GCT
                   c      GCCA caaccctatt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G A G G G     C
    G         | | |                 T T
    C       A A C C
      T T A        A     CGTACGCGAAAGTGTACC
                    G - C
                    T + G
                    A - T
                    C - G
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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