The detailed information of tRNA gene sequence


Sequence ID>WENV180080921
Genome IDMPMC02066419
Search identical group
Phylum/Class[MPMC] marine metagenome; 100 m water sample filtered on 30 um supor filter
Species
Start position on genome 133270
End posion on genome 133194
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
tgattgttga
tRNA gene sequence 
TGCGGGATGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTTGGTTCAAA
TCCAGCTCCCGCTACCA
Downstream region at tRNA end position 
tttgattaag
Secondary structure (Cloverleaf model)
>WENV180080921	fMet	CAT
                   a      ACCA tttgattaag
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C G A C C     A
      T G A        G      | + | | |     A
    C       C G A G       G T T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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