The detailed information of tRNA gene sequence


Sequence ID>WENV180080922
Genome IDMPMC02066419
Search identical group
Phylum/Class[MPMC] marine metagenome; 100 m water sample filtered on 30 um supor filter
Species
Start position on genome 133108
End posion on genome 133032
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
tgcacgttga
tRNA gene sequence 
TGCGGGATGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTTGGTTCAAA
TCCAGCTCCCGCTACCA
Downstream region at tRNA end position 
agtttctaaa
Secondary structure (Cloverleaf model)
>WENV180080922	fMet	CAT
                   a      ACCA agtttctaaa
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C G A C C     A
      T G A        G      | + | | |     A
    C       C G A G       G T T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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