The detailed information of tRNA gene sequence


Sequence ID>WENV180081253
Genome IDMPMC02099349
Search identical group
Phylum/Class[MPMC] marine metagenome; 100 m water sample filtered on 30 um supor filter
Species
Start position on genome 66
End posion on genome 139
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
cggtaatttg
tRNA gene sequence 
GGCCACGTGGCGGAATGGTTACGCAGAGGATTGCAAATCCTTCTATCCCAGTTCGATTCT
GGGCGTGGCCTCCA
Downstream region at tRNA end position 
aaatttattg
Secondary structure (Cloverleaf model)
>WENV180081253	Cys	GCA
                   g      TCCA aaatttattg
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     C - G
                     G - C          T T
                    T     G G G T C     A
        A A        G      | | | | |     G
      T     G G C G       C C C A G     C
      G       | | |                 T T
      G     A C G C
        T T        A     CTAT
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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