The detailed information of tRNA gene sequence


Sequence ID>WENV180081293
Genome IDMPMC02102034
Search identical group
Phylum/Class[MPMC] marine metagenome; 100 m water sample filtered on 30 um supor filter
Species
Start position on genome 1670
End posion on genome 1594
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
cagatcaaac
tRNA gene sequence 
CGCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCACAGGTTCAAA
TCCTGTCCCCGCAACCA
Downstream region at tRNA end position 
atgaaggccc
Secondary structure (Cloverleaf model)
>WENV180081293	fMet	CAT
                   c      ACCA atgaaggccc
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G T C C     A
      C G A        G      | | | | |     A
    C       C G A G       A C A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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