The detailed information of tRNA gene sequence


Sequence ID>WENV180081371
Genome IDMPMC02111595
Search identical group
Phylum/Class[MPMC] marine metagenome; 100 m water sample filtered on 30 um supor filter
Species
Start position on genome 338
End posion on genome 415
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position
aaagccttta
tRNA gene sequence
GGAGTGGTAGTTCAGTTTGGTTAGAATGCCTGCCTGTCACGCAGGAGGTCGCGGGTTCGA
GTCCCGTCCACTCCGCCA
Downstream region at tRNA end position
gaacctgtga
Secondary structure (Cloverleaf model)
>WENV180081371	Asp	GTC
                   a      GCCA gaacctgtga
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     G - C          T G
                    T     T G C C C     A
    T T G A        A      + | | | |     G
  T         C T T G       G C G G G     C
  G         | | | +                 T T
  G         G A A T
    T T A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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