The detailed information of tRNA gene sequence


Sequence ID>WENV180081508
Genome IDMPMC02122553
Search identical group
Phylum/Class[MPMC] marine metagenome; 100 m water sample filtered on 30 um supor filter
Species
Start position on genome 606
End posion on genome 530
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
nnnnnnnnnt
tRNA gene sequence 
CGGGGTGTAGCTCAGCCTGGTAGAGCACTGCCTTCGGGAGGCAGGGGCCGGAGGTTCAAA
TCCTCTCACCCCGACCA
Downstream region at tRNA end position 
ttttcagaaa
Secondary structure (Cloverleaf model)
>WENV180081508	Pro	CGG
                   t      ACCA ttttcagaaa
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     A
    C       C T C G       G G A G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     GGGCC
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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