The detailed information of tRNA gene sequence


Sequence ID>WENV180081882
Genome IDMPMC02158850
Search identical group
Phylum/Class[MPMC] marine metagenome; 100 m water sample filtered on 30 um supor filter
Species
Start position on genome 1127
End posion on genome 1053
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gacatcttat
tRNA gene sequence 
AGGAGTGTAGCTCAATTAGGTAGAGCACCGGTCTCCAAAACCGGGGGTTGCAGGTTCGAT
TCCTGTCACTCCTGCag
Downstream region at tRNA end position 
taaaagtaca
Secondary structure (Cloverleaf model)
>WENV180081882	Trp	CCA
                   t      GCag taaaagtaca
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T T
                    T     T G T C C     A
      T A A        A      + | | | |     G
    T       C T C G       G C A G G     C
    A       | | | |                 T T
    G       G A G C
      G T A        A     GGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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