The detailed information of tRNA gene sequence


Sequence ID>WENV180081987
Genome IDMPMC02170606
Search identical group
Phylum/Class[MPMC] marine metagenome; 100 m water sample filtered on 30 um supor filter
Species
Start position on genome 986
End posion on genome 1062
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
ttttggtcga
tRNA gene sequence 
CGCGGGGTAGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGGGAGTTCAAA
TCTCCCCCCCGCCACCA
Downstream region at tRNA end position 
attaagaccc
Secondary structure (Cloverleaf model)
>WENV180081987	fMet	CAT
                   a      ACCA attaagaccc
                     C   C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C C C T C     A
      T G A        A      | | | | |     A
    C       C G A G       G G G A G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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