The detailed information of tRNA gene sequence


Sequence ID>WENV180082307
Genome IDMPMC02205877
Search identical group
Phylum/Class[MPMC] marine metagenome; 100 m water sample filtered on 30 um supor filter
Species
Start position on genome 5126
End posion on genome 5055
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position
agtcagtcag
tRNA gene sequence
GGGCGATTAGCTCAGAGGTAGAGCACTACCTTGACACGGTAGGAGTCACTGGTTCGATTC
CAGTATCGCCCAtcc
Downstream region at tRNA end position
ccctttgagg
Secondary structure (Cloverleaf model)
>WENV180082307	Val	GAC
                   g      Atcc ccctttgagg
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T T
                    T     T G A C C     A
        G A        A      | | | | |     G
      A     C T C G       A C T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GAGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  T       C
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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