The detailed information of tRNA gene sequence


Sequence ID>WENV180082440
Genome IDMPMC02222491
Search identical group
Phylum/Class[MPMC] marine metagenome; 100 m water sample filtered on 30 um supor filter
Species
Start position on genome 245
End posion on genome 318
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tttggttcaa
tRNA gene sequence 
AGGGCAGTGGCTCAATTGGTAGAGCACCGGTCTCCAAAACCGGCGGTTGGGGGTTCGAGT
CCCTCCTGCCCTGCaa
Downstream region at tRNA end position 
ggtaggtcgc
Secondary structure (Cloverleaf model)
>WENV180082440	Trp	CCA
                   a      GCaa ggtaggtcgc
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      T A A        G      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     CGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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