The detailed information of tRNA gene sequence


Sequence ID>WENV180082548
Genome IDMPMC02233572
Search identical group
Phylum/Class[MPMC] marine metagenome; 100 m water sample filtered on 30 um supor filter
Species
Start position on genome 4723
End posion on genome 4812
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gccgcaagcc
tRNA gene sequence 
GGAGACGTGGGTGAGTGGCTGAAACCAACGCTTTGCTAAAGCGTCGTACGGGAAACCGTA
CCGAGGGTTCGAATCCCTCCGTCTCCGCCA
Downstream region at tRNA end position 
tatctgtgcc
Secondary structure (Cloverleaf model)
>WENV180082548	Ser	GCT
                   c      GCCA tatctgtgcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G A G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTACGGGAAACCGTACC
                    A - T
                    C - G
                    G - C
                    C - G
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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