The detailed information of tRNA gene sequence


Sequence ID>WENV180082555
Genome IDMPMC02234085
Search identical group
Phylum/Class[MPMC] marine metagenome; 100 m water sample filtered on 30 um supor filter
Species
Start position on genome 260
End posion on genome 184
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
taacctctgg
tRNA gene sequence 
TGCGGGATGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTTGGTTCAAA
TCCAGCTCCCGCTACCA
Downstream region at tRNA end position 
atttatttat
Secondary structure (Cloverleaf model)
>WENV180082555	fMet	CAT
                   g      ACCA atttatttat
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C G A C C     A
      T G A        G      | + | | |     A
    C       C G A G       G T T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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