The detailed information of tRNA gene sequence


Sequence ID>WENV180082704
Genome IDMPMC02250414
Search identical group
Phylum/Class[MPMC] marine metagenome; 100 m water sample filtered on 30 um supor filter
Species
Start position on genome 1155
End posion on genome 1065
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cctcagtggc
tRNA gene sequence 
GGAAGGTTGCCAGAGCGGACGAATGGGGCGGCCTCGAAAGCCGTTGTGGCGCTTAGCGTC
ACCGTGGGTTCGAATCCCACACCTTCCGCCA
Downstream region at tRNA end position 
atttttattt
Secondary structure (Cloverleaf model)
>WENV180082704	Ser	CGA
                   c      GCCA atttttattt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     T - A          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G A C C       G T G G G     C
    G         | | |                 T T
    A       A T G G
      C G A        G     TGTGGCGCTTAGCGTCACC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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