The detailed information of tRNA gene sequence


Sequence ID>WENV180083004
Genome IDMPMD02002546
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 9538
End posion on genome 9635
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tccctcaggt
tRNA gene sequence 
GGGAGTGGATCGGTGCTGGTGTGCCGCCCGGTCTTCAAAGCCGGTAGGGCCTCGTGAACA
GCGGGGCCGGTGGGTTCGATTCCCATGCACTCCCGCCA
Downstream region at tRNA end position 
cacccttcat
Secondary structure (Cloverleaf model)
>WENV180083004	SeC	TCA
                   t      GCCA cacccttcat
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     G   G          T T
                    A     T A C C C     A
      T C G        T      + | | | |     G
    G       T G G C       G T G G G     C
    G       + | | |                 T T
    T       G C C G
      G T          C     TAGGGCCTCGTGAACAGCGGGGCCG
                    C - G
                    C - G
                    G - C
                    G - C
                    T + G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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