The detailed information of tRNA gene sequence


Sequence ID>WENV180083018
Genome IDMPMD02003866
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 1170
End posion on genome 1097
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
agataggttt
tRNA gene sequence 
AGGTGAGTAGTTCAATTGGTAGAGCACCGGCCTCCAAAGCCGGGAGTTGAGGGTTCGAGT
CCTTCCTCACCTGCaa
Downstream region at tRNA end position 
gcccggttta
Secondary structure (Cloverleaf model)
>WENV180083018	Trp	CCA
                   t      GCaa gcccggttta
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C          T G
                    T     C T T C C     A
      T A A        A      | | + | |     G
    T       C T T G       G A G G G     C
    G       | | + |                 T T
    G       G A G C
      T A          A     GAGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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