The detailed information of tRNA gene sequence


Sequence ID>WENV180083026
Genome IDMPMD02005412
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 56
End posion on genome 130
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
tagtatccat
tRNA gene sequence 
TGCGGGGTAGAGAAGTGGCATCTCATCTGGCTCATTACTAGAAGATCGTAGGTTCGATTC
CTACCCCCGCTACCA
Downstream region at tRNA end position 
atagaaatta
Secondary structure (Cloverleaf model)
>WENV180083026	fMet	CAT
                   t      ACCA atagaaatta
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T T
                    T     C A T C C     A
        G A        A      | | | | |     G
      T     A G A G       G T A G G     C
      G     | | | |                 T T
      G     T C T C
        C A        A     AGATC
                    T - A
                    C - G
                    T - A
                    G + T
                    G - C
                  C       A
                  T       T
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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