The detailed information of tRNA gene sequence


Sequence ID>WENV180083061
Genome IDMPMD02009989
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 400
End posion on genome 319
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
caccagcaga
tRNA gene sequence 
GACACTTTGGCCGAGCGGTTAAGGCGTCGGCCTGCTAAGCCGATGGGGTCTCCCCGCGTG
GGTTCGAATCCCACAGGTGTCGttc
Downstream region at tRNA end position 
tttcttgttt
Secondary structure (Cloverleaf model)
>WENV180083061	Ser	GCT
                   a      Gttc tttcttgttt
                     G - C
                     A - T
                     C - G
                     A - T
                     C - G
                     T + G
                     T - A          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T A          G     TGGGGTCTCCCCGC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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