The detailed information of tRNA gene sequence


Sequence ID>WENV180083068
Genome IDMPMD02010973
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 4392
End posion on genome 4305
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
agataccatc
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGCTGAAGGAGCACGCTTGGAAAGCGTGTAAACGGCAACGTTTC
GTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
ccccgtgtcc
Secondary structure (Cloverleaf model)
>WENV180083068	Ser	GGA
                   c      GCCA ccccgtgtcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G         | | |                 T T
    C       A G G A
      T G A        G     TAAACGGCAACGTTTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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