The detailed information of tRNA gene sequence


Sequence ID>WENV180083093
Genome IDMPMD02013708
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 203
End posion on genome 300
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
cctccgcgac
tRNA gene sequence 
GGAGGCGCTTCCTAGGCTGGTGCCAGGCCCGGTCTTCAAAACCGGTGGGCGGCGGTAGTC
CCGTCGTCGGTGGGTTCGATTCCCATGCGTCTCCGCCA
Downstream region at tRNA end position 
acttccccca
Secondary structure (Cloverleaf model)
>WENV180083093	SeC	TCA
                   c      GCCA acttccccca
                     G - C
                     G - C
                     A - T
                     G - C
                     G + T
                     C - G
                     G - C
                     C - G          T T
                    T     T A C C C     A
      C G G        T      + | | | |     G
    T       A T C C       G T G G G     C
    G         | | |                 T T
    G       C A G G
      T G C        C     TGGGCGGCGGTAGTCCCGTCGTCG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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