The detailed information of tRNA gene sequence


Sequence ID>WENV180083162
Genome IDMPMD02022193
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 657
End posion on genome 746
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cctgttcacT
tRNA gene sequence 
GGACAGGTGACCGAGCGGCTGATGGTGCAGCACTGGAAATGCTGTGTGCGCCTTGTGCGT
ACCGAGGGTTCGAATCCCTCCCTGTCCGTtt
Downstream region at tRNA end position 
ttttatgtaa
Secondary structure (Cloverleaf model)
>WENV180083162	Ser	GGA
                   T      GTtt ttttatgtaa
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C A       G A G G G     C
    G       + | | |                 T T
    C       T G G T
      T G A        G     TGTGCGCCTTGTGCGTACC
                    C - G
                    A - T
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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