The detailed information of tRNA gene sequence


Sequence ID>WENV180083199
Genome IDMPMD02025029
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 164851
End posion on genome 164940
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
attagagttc
tRNA gene sequence 
GGAGAGGTGGCAGAGCGGTCGAATGCGGCGGTCTTGAAAACCGTTGACCCTTCACCGGGT
CCGGGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
tttcccgcac
Secondary structure (Cloverleaf model)
>WENV180083199	Ser	TGA
                   c      GCCA tttcccgcac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        G     TGACCCTTCACCGGGTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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