The detailed information of tRNA gene sequence


Sequence ID>WENV180083221
Genome IDMPMD02027317
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 112
End posion on genome 186
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
cggaccctgc
tRNA gene sequence 
CGCGGGGTAGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAA
TCCGGCCCCCGCAACtt
Downstream region at tRNA end position 
cgaaggcgac
Secondary structure (Cloverleaf model)
>WENV180083221	fMet	CAT
                   c      ACtt cgaaggcgac
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G G C C     A
      T G A        A      | + | | |     A
    C       C G A G       G T C G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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