The detailed information of tRNA gene sequence


Sequence ID>WENV180083263
Genome IDMPMD02034498
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 605
End posion on genome 516
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
atacccctgt
tRNA gene sequence 
GGAGAGGTGCCGGAGTGGCTGAACGGGCTGGTTTCGAAAACCAGTGTAGGCCTTGGTCTA
CCGGGGGTTCGAATCCCCCTCTCTCCGCCA
Downstream region at tRNA end position 
gtttgttccc
Secondary structure (Cloverleaf model)
>WENV180083263	Ser	CGA
                   t      GCCA gtttgttccc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G G C C       G G G G G     C
    G         | | |                 T T
    C       A C G G
      T G A        G     TGTAGGCCTTGGTCTACC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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