The detailed information of tRNA gene sequence


Sequence ID>WENV180083322
Genome IDMPMD02041708
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 4224
End posion on genome 4149
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttgcgcgttt
tRNA gene sequence 
AGGGGCATAGCTCAGTTGGTAGAGCGACGGTCTCCAAAACCGTAGGTCGCGGGTTCGAAC
CCTGCTGCCCCTGCCA
Downstream region at tRNA end position 
tcttccggcg
Secondary structure (Cloverleaf model)
>WENV180083322	Trp	CCA
                   t      GCCA tcttccggcg
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T          C A
                    T     C G T C C     A
      T G A        A      | | + | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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