The detailed information of tRNA gene sequence


Sequence ID>WENV180083325
Genome IDMPMD02042241
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 196
End posion on genome 120
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gtccccgttt
tRNA gene sequence 
GCCGAAGTAGCTCAGGTGGTTAGAGCAGGCGTTTCATACGCGCCTTGTCGGGGGTTCGAG
TCCCTCCTTCGGCACCA
Downstream region at tRNA end position 
tctacagatt
Secondary structure (Cloverleaf model)
>WENV180083325	Met	CAT
                   t      ACCA tctacagatt
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T G
                    T     C T C C C     A
      G G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TTGTC
                    G - C
                    G - C
                    C - G
                    G - C
                    T + G
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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