The detailed information of tRNA gene sequence


Sequence ID>WENV180083351
Genome IDMPMD02046273
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 317
End posion on genome 392
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
tgtttggtat
tRNA gene sequence 
TGCGGGGTGGCGCAGTTGGTAGCGCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAGT
CCGGCCCCCGCGACCA
Downstream region at tRNA end position 
ggcggctcgt
Secondary structure (Cloverleaf model)
>WENV180083351	fMet	CAT
                   t      ACCA ggcggctcgt
                     T + G
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     C G G C C     A
      T G A        G      | + | | |     A
    T       C G C G       G T C G G     C
    G       | | | |                 T T
    G       G C G C
      T A          G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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