The detailed information of tRNA gene sequence


Sequence ID>WENV180083359
Genome IDMPMD02048296
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 28419
End posion on genome 28330
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cctcgtcggt
tRNA gene sequence 
GGAAGGTTGCCAGAGCGGACGAATGGGGCGGCCTCGAAAGCCGTTGTGGCCTCCGGGTCA
CCATGGGTTCAAATCCCATACCTTCCGCCA
Downstream region at tRNA end position 
agtcgatgac
Secondary structure (Cloverleaf model)
>WENV180083359	Ser	CGA
                   t      GCCA agtcgatgac
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     T - A          T A
                    T     T A C C C     A
      C G A        G      | | | | |     A
    G       G A C C       A T G G G     C
    G         | | |                 T T
    A       A T G G
      C G A        G     TGTGGCCTCCGGGTCACC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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