The detailed information of tRNA gene sequence


Sequence ID>WENV180083389
Genome IDMPMD02052075
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 5964
End posion on genome 6051
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
gcctcacccg
tRNA gene sequence 
GCCCGGGTGGCGGAATTGGCAGACGCGCATGGTTCAGGTCCATGTTCCCGTTAAGGGAGT
GGGGGTTCGACTCCCCCCTCGGGCACCA
Downstream region at tRNA end position 
ctctcctcgc
Secondary structure (Cloverleaf model)
>WENV180083389	Leu	CAG
                   g      ACCA ctctcctcgc
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     G + T
                     G - C          T C
                    T     C C C C C     A
      T A A        G      | | | | |     G
    T       G G C G       G G G G G     C
    G         | | |                 T T
    G       A C G C
      C A G        G     TTCCCGTTAAGGGAGT
                    C - G
                    A - T
                    T - A
                    G - C
                    G - C
                  T       T
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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